Regarding engine removal, I have done both, subframe lowering and out through the bonnet opening. To drop the subframe you need a proper hoist to get the car up high enough and a stand to put the subframe onto. I didn't and it was a struggle to get the car high enough. Taking the motor out through the engine bay was much faster and easier, I didn't remove the trans but that probably easier with the engine removed.
When I replaced the ECU I replaced the ECU, and had a locksmith clone the ECU chip to a new key that suits the existing key. I have had no problems. You could change ALL the locks if you wanted but it seemed far too much work.
When I replaced the ECU I replaced the ECU, and had a locksmith clone the ECU chip to a new key that suits the existing key. I have had no problems. You could change ALL the locks if you wanted but it seemed far too much work.